STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPDR1Ependymin related 1. (123 aa)    
Predicted Functional Partners:
TSKU
Tsukushi, small leucine rich proteoglycan.
   
  
 0.685
AVL9
AVL9 cell migration associated.
      
 0.675
SLC12A6
Solute carrier family 12 member 6.
      
 0.649
DLGAP2
DLG associated protein 2.
      
 0.643
ARHGEF7
Rho guanine nucleotide exchange factor 7.
      
 0.643
CREG1
Cellular repressor of E1A stimulated genes 1; Belongs to the CREG family.
      
 0.639
TOX4
TOX high mobility group box family member 4.
      
 0.636
TDRP
Testis development related protein.
      
 0.636
TRIM62
Tripartite motif containing 62.
      
 0.609
ATP6V1B2
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
   
  
 0.596
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.