STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT17Synaptotagmin 17. (562 aa)    
Predicted Functional Partners:
MRPL13
Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
      
 0.814
TAF2
TATA-box binding protein associated factor 2.
   
  
 0.733
NT5DC3
5'-nucleotidase domain containing 3.
      
 0.714
DSCC1
DNA replication and sister chromatid cohesion 1.
      
 0.713
AGBL4
ATP/GTP binding protein like 4.
      
 0.713
ABCD3
ATP binding cassette subfamily D member 3.
      
 0.712
ENTPD4
Ectonucleoside triphosphate diphosphohydrolase 4; Belongs to the GDA1/CD39 NTPase family.
      
 0.663
MTBP
MDM2 binding protein.
    
 
 0.650
GSG1L
GSG1 like.
      
 0.637
SNTB1
Syntrophin beta 1.
   
  
 0.600
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.