STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC491421Uncharacterized protein. (256 aa)    
Predicted Functional Partners:
PNMA1
PNMA family member 1.
   
 0.692
CCDC8
Coiled-coil domain containing 8.
    
 
 0.591
FAR1
Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.
   
 
 0.522
CCDC77
Coiled-coil domain containing 77.
      
 0.497
SASH3
SAM and SH3 domain containing 3.
      
 0.489
CBWD1
Uncharacterized protein.
      
 0.475
ENSCAFP00000064644
Uncharacterized protein.
      
 0.475
U2SURP
U2 snRNP associated SURP domain containing.
   
  
 0.463
MBTPS1
Membrane bound transcription factor peptidase, site 1.
   
 
 0.456
POLR3D
RNA polymerase III subunit D.
   
 
 0.455
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.