STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAPAVAMP associated protein A. (294 aa)    
Predicted Functional Partners:
STARD3
StAR related lipid transfer domain containing 3.
   
 0.992
OSBP
Oxysterol-binding protein; Belongs to the OSBP family.
    
 
 0.979
VAPB
VAMP associated protein B and C.
  
0.971
SNX2
Sorting nexin 2.
   
 
 0.931
STARD3NL
STARD3 N-terminal like.
   
 
 0.810
ACBD5
Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters.
   
 
 0.803
OSBP2
Oxysterol-binding protein; Belongs to the OSBP family.
    
 
 0.802
ZFYVE27
Zinc finger FYVE-type containing 27.
    
 
 0.779
PITPNM1
Phosphatidylinositol transfer protein membrane associated 1.
    
 
 0.725
CERT1
Ceramide transporter 1.
   
 
 0.709
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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