Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DERL2 | ERP44 | ENSCAFP00000055568 | ENSCAFP00000003711 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Endoplasmic reticulum protein 44. | 0.556 |
DERL2 | FKBP7 | ENSCAFP00000055568 | ENSCAFP00000042734 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Peptidylprolyl isomerase. | 0.569 |
DERL2 | HYOU1 | ENSCAFP00000055568 | ENSCAFP00000054908 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Hypoxia up-regulated 1. | 0.569 |
DERL2 | OS9 | ENSCAFP00000055568 | ENSCAFP00000000376 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | OS9 endoplasmic reticulum lectin. | 0.942 |
DERL2 | PDIA4 | ENSCAFP00000055568 | ENSCAFP00000056407 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Protein disulfide isomerase family A member 4; Belongs to the protein disulfide isomerase family. | 0.531 |
EMC4 | EMC7 | ENSCAFP00000011782 | ENSCAFP00000041174 | ER membrane protein complex subunit 4; Belongs to the EMC4 family. | ER membrane protein complex subunit 7. | 0.993 |
EMC4 | FKBP7 | ENSCAFP00000011782 | ENSCAFP00000042734 | ER membrane protein complex subunit 4; Belongs to the EMC4 family. | Peptidylprolyl isomerase. | 0.537 |
EMC4 | OS9 | ENSCAFP00000011782 | ENSCAFP00000000376 | ER membrane protein complex subunit 4; Belongs to the EMC4 family. | OS9 endoplasmic reticulum lectin. | 0.487 |
EMC7 | EMC4 | ENSCAFP00000041174 | ENSCAFP00000011782 | ER membrane protein complex subunit 7. | ER membrane protein complex subunit 4; Belongs to the EMC4 family. | 0.993 |
EMC7 | FKBP7 | ENSCAFP00000041174 | ENSCAFP00000042734 | ER membrane protein complex subunit 7. | Peptidylprolyl isomerase. | 0.524 |
EMC7 | OS9 | ENSCAFP00000041174 | ENSCAFP00000000376 | ER membrane protein complex subunit 7. | OS9 endoplasmic reticulum lectin. | 0.448 |
ENPP4 | FKBP7 | ENSCAFP00000002967 | ENSCAFP00000042734 | Ectonucleotide pyrophosphatase/phosphodiesterase 4. | Peptidylprolyl isomerase. | 0.524 |
ENPP4 | PDIA5 | ENSCAFP00000002967 | ENSCAFP00000017744 | Ectonucleotide pyrophosphatase/phosphodiesterase 4. | Protein disulfide isomerase family A member 5. | 0.530 |
ERP44 | DERL2 | ENSCAFP00000003711 | ENSCAFP00000055568 | Endoplasmic reticulum protein 44. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.556 |
ERP44 | FKBP7 | ENSCAFP00000003711 | ENSCAFP00000042734 | Endoplasmic reticulum protein 44. | Peptidylprolyl isomerase. | 0.562 |
FKBP7 | DERL2 | ENSCAFP00000042734 | ENSCAFP00000055568 | Peptidylprolyl isomerase. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.569 |
FKBP7 | EMC4 | ENSCAFP00000042734 | ENSCAFP00000011782 | Peptidylprolyl isomerase. | ER membrane protein complex subunit 4; Belongs to the EMC4 family. | 0.537 |
FKBP7 | EMC7 | ENSCAFP00000042734 | ENSCAFP00000041174 | Peptidylprolyl isomerase. | ER membrane protein complex subunit 7. | 0.524 |
FKBP7 | ENPP4 | ENSCAFP00000042734 | ENSCAFP00000002967 | Peptidylprolyl isomerase. | Ectonucleotide pyrophosphatase/phosphodiesterase 4. | 0.524 |
FKBP7 | ERP44 | ENSCAFP00000042734 | ENSCAFP00000003711 | Peptidylprolyl isomerase. | Endoplasmic reticulum protein 44. | 0.562 |
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