STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J9PAH1_CANLFUncharacterized protein. (231 aa)    
Predicted Functional Partners:
SNW1
SNW domain containing 1.
   
 
 0.890
CDC5L
Cell division cycle 5 like.
   
 
 0.889
PLRG1
Pleiotropic regulator 1.
   
 
 0.887
XAB2
XPA binding protein 2.
    
 
 0.883
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
    
 
 0.877
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
    
 
 0.873
RBM22
RNA binding motif protein 22.
   
 
 0.865
BCAS2
BCAS2 pre-mRNA processing factor.
   
 
 0.863
ISY1
Uncharacterized protein.
   
 
 0.856
PRPF8
Pre-mRNA processing factor 8.
    
 
 0.854
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.