STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHMP4ACharged multivesicular body protein 4A. (261 aa)    
Predicted Functional Partners:
SLC5A8
Solute carrier family 5 member 8; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
   
    0.805
PTPN23
Protein tyrosine phosphatase non-receptor type 23.
    
 
 0.768
PDCD6IP
Programmed cell death 6 interacting protein.
   
 
 0.747
VPS4A
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.669
CHMP2A
Charged multivesicular body protein 2A.
   
 
 0.659
IST1
IST1 factor associated with ESCRT-III.
     
 0.616
CHMP6
Charged multivesicular body protein 6.
     
0.608
CHMP2B
Charged multivesicular body protein 2B.
   
 
 0.602
CHMP3
Uncharacterized protein.
    
 0.596
CHMP7
Charged multivesicular body protein 7.
    
 0.588
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.