STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACOD1Aconitate decarboxylase 1. (482 aa)    
Predicted Functional Partners:
TRMU
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.
   
 
 0.737
NIT2
Nitrilase family member 2.
   
  
 0.723
GTPBP3
GTP binding protein 3, mitochondrial.
   
 
 0.722
GLDC
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
   
 
 0.715
SQOR
Pyr_redox_2 domain-containing protein.
  
 0.678
PYROXD1
Pyridine nucleotide-disulphide oxidoreductase domain 1.
  
 0.676
AIFM2
Apoptosis inducing factor mitochondria associated 2.
  
 0.676
AIFM3
Apoptosis inducing factor mitochondria associated 3.
  
 0.676
AIFM1
Apoptosis inducing factor mitochondria associated 1.
  
 0.676
MOCOS
Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.
   
 
 0.645
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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