STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTF2Replication termination factor 2. (349 aa)    
Predicted Functional Partners:
HOXB8
Homeobox B8.
      
 0.788
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
   
  
 0.525
SDE2
SDE2 telomere maintenance homolog.
      
 0.520
DDI1
DNA damage inducible 1 homolog 1.
    
 
 0.516
RBM17
RNA binding motif protein 17.
      
 0.497
UBXN7
UBX domain-containing protein 7.
      
 0.482
SPRTN
SprT-like N-terminal domain.
      
 0.481
C24H20orf85
Chromosome 24 C20orf85 homolog.
      
 0.465
TRAIP
TRAF interacting protein.
      
 0.463
NPEPL1
Aminopeptidase like 1.
      
 0.461
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.