STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF654Zinc finger protein 654. (1170 aa)    
Predicted Functional Partners:
LTN1
Listerin E3 ubiquitin protein ligase 1.
   
    0.658
LRRC1
Leucine rich repeat containing 1.
    
 
 0.537
ZNF366
Zinc finger protein 366.
   
  
 0.521
RCAN3
RCAN family member 3.
      
 0.515
TMEM120B
Transmembrane protein 120B.
   
  
 0.506
PPFIA4
PTPRF interacting protein alpha 4.
      
 0.499
CCDC6
Coiled-coil domain containing 6.
   
 
 0.471
DDX58
DExD/H-box helicase 58.
    
 
 0.461
TET2
Tet methylcytosine dioxygenase 2.
  
  
 0.431
AMOTL1
Angiomotin like 1.
    
 
 0.402
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.