STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAFP00000044396Uncharacterized protein. (185 aa)    
Predicted Functional Partners:
ENSCAFP00000058388
Uncharacterized protein.
 
      0.899
PQBP1
Polyglutamine binding protein 1.
    
 
 0.646
SF3A2
Splicing factor 3a subunit 2.
   
 
 0.559
KIAA0825
KIAA0825.
      
 0.515
HEATR1
HEAT repeat containing 1.
   
  
 0.490
RPUSD2
RNA pseudouridine synthase domain containing 2.
      
 0.478
MPHOSPH10
U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family.
      
 0.478
TRMT112
tRNA methyltransferase subunit 11-2.
      
 0.478
SNW1
SNW domain containing 1.
   
 
 0.477
UTP20
UTP20 small subunit processome component.
      
 0.463
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.