STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAFP00000045090Uncharacterized protein. (451 aa)    
Predicted Functional Partners:
LMNTD1
Lamin tail domain containing 1.
      
 0.515
YIF1A
Yip1 interacting factor homolog A, membrane trafficking protein.
      
 0.499
MTURN
Maturin, neural progenitor differentiation regulator homolog.
      
 0.493
DPY19L4
Dpy-19 like 4.
      
 0.483
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein.
      
 0.482
DPY19L1
Dpy-19 like C-mannosyltransferase 1.
      
 0.457
DCAF16
DDB1 and CUL4 associated factor 16.
      
 0.446
RNF139
Ring finger protein 139.
      
 0.446
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.