STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDM6ALysine demethylase 6A. (1453 aa)    
Predicted Functional Partners:
LOC111090006
Histone H3; Belongs to the histone H3 family.
   
 0.986
LOC488263
Histone H3; Belongs to the histone H3 family.
   
 0.986
H3C13
Histone H3.
   
 
 0.978
ENSCAFP00000045302
annotation not available
   
 
 0.968
LOC111093988
Histone H3.1.
   
 
 0.968
LOC611519
Histone H3.1.
   
 
 0.968
LOC106558266
Histone H3.1.
   
 
 0.968
LOC106557493
Histone H3.1.
   
 
 0.968
ENSCAFP00000060440
annotation not available
   
 
 0.968
ENSCAFP00000062267
annotation not available
   
 
 0.968
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.