STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC611979Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (616 aa)    
Predicted Functional Partners:
CABCOCO1
Ciliary associated calcium binding coiled-coil 1.
   
    0.805
SLC35A2
UDP-galactose translocator; Transports nucleotide sugars from the cytosol into Golgi vesicles where glycosyltransferases function.
   
  
 0.678
LAPTM4A
Lysosomal protein transmembrane 4 alpha.
   
  
 0.640
VPS54
VPS54 subunit of GARP complex.
      
 0.609
UGP2
UTP--glucose-1-phosphate uridylyltransferase.
   
  
 0.569
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
   
  
 0.561
GLG1
Golgi glycoprotein 1.
   
  
 0.534
SPTLC2
Serine palmitoyltransferase long chain base subunit 2.
   
  
 0.525
PIGW
Phosphatidylinositol-glycan biosynthesis class W protein; Probable acetyltransferase, which acetylates the inositol ring of phosphatidylinositol during biosynthesis of GPI-anchor.
   
  
 0.519
TMEM165
Transmembrane protein 165.
   
  
 0.519
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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