STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS4AAAA domain-containing protein; Belongs to the AAA ATPase family. (453 aa)    
Predicted Functional Partners:
VTA1
Vesicle trafficking 1.
   
 0.997
CHMP6
Charged multivesicular body protein 6.
   
 0.991
CHMP1A
Charged multivesicular body protein 1A.
   
 0.990
CHMP2B
Charged multivesicular body protein 2B.
   
 0.984
CHMP4C
Charged multivesicular body protein 4C.
   
 0.984
CHMP4B
Charged multivesicular body protein 4B.
    
 0.980
CHMP3
Uncharacterized protein.
   
 0.974
IST1
IST1 factor associated with ESCRT-III.
   
 0.972
VPS4B
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
  
 
0.958
CHMP7
Charged multivesicular body protein 7.
   
 0.957
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.