STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRPPACDP-L-ribitol pyrophosphorylase A. (458 aa)    
Predicted Functional Partners:
FKRP
Fukutin related protein.
    
 
 0.883
FKTN
Fukutin.
      
 0.876
RXYLT1
Uncharacterized protein.
  
   
 0.861
POMT1
Protein O-mannosyltransferase 1.
    
 
 0.851
B4GAT1
Beta-1,4-glucuronyltransferase 1.
      
 0.779
POMT2
Protein O-mannosyltransferase 2.
    
 
 0.740
DOLK
Dolichol kinase.
      
 0.730
POMK
Protein O-mannose kinase.
      
 0.709
B3GALNT2
Beta-1,3-N-acetylgalactosaminyltransferase 2.
      
 0.703
SFI1
SFI1 centrin binding protein.
    
 
 0.667
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.