Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CPEB3Cytoplasmic polyadenylation element binding protein 3. (715 aa)    
Predicted Functional Partners:
CPEB4
Cytoplasmic polyadenylation element binding protein 4.
   
  0.993
CPEB2
Cytoplasmic polyadenylation element binding protein 2.
   
  0.992
PLK1
Serine/threonine-protein kinase PLK.
   
 0.909
CDK1
Cyclin dependent kinase 1; Belongs to the protein kinase superfamily.
    
 0.897
CPEB1
RRM domain-containing protein.
   
 0.799
RNF130
Ring finger protein 130.
   
 
 0.786
AURKA
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.670
ENSCAFP00000050409
Protein kinase domain-containing protein.
   
 0.670
ENSCAFP00000058526
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.670
TOB1
Transducer of ERBB2, 1.
    
 0.660
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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