STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORMDL1ORMDL sphingolipid biosynthesis regulator 1. (639 aa)    
Predicted Functional Partners:
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
   
 
 0.811
RSL24D1
Ribosomal L24 domain containing 1.
   
  
 0.742
TMED9
Transmembrane p24 trafficking protein 9.
   
 
 0.736
MRFAP1
Uncharacterized protein.
   
  
 0.727
ZC3H11A
Uncharacterized protein.
      
 0.720
ARFGAP2
ADP ribosylation factor GTPase activating protein 2.
      
 0.719
PMS1
PMS1 homolog 1, mismatch repair system component.
   
  
 0.713
SPTLC3
Serine palmitoyltransferase long chain base subunit 3.
    
 
 0.691
SPTLC2
Serine palmitoyltransferase long chain base subunit 2.
   
 
 0.665
CASC3
CASC3 exon junction complex subunit.
      
 0.662
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.