STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR39U1Short chain dehydrogenase/reductase family 39U member 1. (294 aa)    
Predicted Functional Partners:
STOML1
Stomatin like 1.
  
  
 0.918
NCLN
Nicalin; May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning.
   
  
 0.895
NYNRIN
NYN domain and retroviral integrase containing.
      
 0.883
STXBP6
Syntaxin binding protein 6.
      
 0.793
CBLN3
Cerebellin 3 precursor.
      
 0.786
GNA11
Uncharacterized protein.
      
 0.628
RNF17
Ring finger protein 17.
      
 0.613
LOXL1
Lysyl oxidase like 1.
      
 0.587
AAGAB
Alpha and gamma adaptin binding protein.
   
  
 0.563
TRIM46
Tripartite motif containing 46.
   
  
 0.528
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.