STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D9BTBC1 domain family member 9B. (1250 aa)    
Predicted Functional Partners:
SUSD1
Sushi domain containing 1.
      
 0.809
AP5M1
Adaptor related protein complex 5 subunit mu 1; Belongs to the adaptor complexes medium subunit family.
      
 0.769
CCDC115
Coiled-coil domain containing 115.
      
 0.681
SPG11
SPG11 vesicle trafficking associated, spatacsin.
      
 0.672
CNKSR2
Connector enhancer of kinase suppressor of Ras 2.
      
 0.667
CNTN3
Contactin 3.
   
  
 0.608
HSPA4L
Heat shock protein family A (Hsp70) member 4 like.
      
 0.582
RBM39
RNA binding motif protein 39.
      
 0.563
GREB1L
GREB1 like retinoic acid receptor coactivator.
      
 0.563
GMFG
Glia maturation factor; Belongs to the actin-binding proteins ADF family. GMF subfamily.
      
 0.563
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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