STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF827Zinc finger protein 827. (1347 aa)    
Predicted Functional Partners:
DCLRE1B
DNA cross-link repair 1B.
    
 
 0.812
RNF166
Ring finger protein 166.
   
 
 0.778
SRBD1
S1 RNA binding domain 1.
    
 
 0.773
PCBP3
Poly(rC) binding protein 3.
    
 
 0.759
NAIF1
Nuclear apoptosis inducing factor 1.
      
 0.751
NR2C1
Nuclear receptor subfamily 2 group C member 1.
    
 
 0.718
CRBN
Cereblon.
    
 
 0.688
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 
 0.662
ENSCAFP00000058271
WD_REPEATS_REGION domain-containing protein.
    
 
 0.662
NR2C2
Nuclear receptor subfamily 2 group C member 2.
   
 
 0.656
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.