STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSTM1V-set and transmembrane domain containing 1. (142 aa)    
Predicted Functional Partners:
GP6
Glycoprotein VI platelet.
   
  
0.670
TTYH1
Protein tweety homolog; Probable chloride channel.
   
  
 0.593
CDC42EP5
CDC42 effector protein 5.
      
 0.563
LOC484309
Uncharacterized protein.
  
   
0.523
ENSCAFP00000051286
Uncharacterized protein.
  
  
 0.520
LENG8
Leukocyte receptor cluster member 8.
      
 0.515
ZNF512
Zinc finger protein 512.
      
 0.499
RPS9
TCF3 fusion partner.
      
 0.489
EFCAB7
EF-hand calcium binding domain 7.
      
 0.489
NCR1
Natural cytotoxicity triggering receptor 1.
      
 0.482
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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