STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMAT1Zinc finger matrin-type 1. (789 aa)    
Predicted Functional Partners:
DRGX
Dorsal root ganglia homeobox.
   
  
 0.894
TPRX1
Homeobox domain-containing protein.
   
  
 0.853
DPRX
Divergent-paired related homeobox.
   
  
 0.705
UNCX
UNC homeobox.
   
  
 0.649
ALX3
ALX homeobox 3.
   
  
 0.600
VSX1
Visual system homeobox 1.
      
 0.592
TOX2
TOX high mobility group box family member 2.
   
  
 0.520
RAX
Retina and anterior neural fold homeobox.
   
  
 0.515
DMTF1
Cyclin D binding myb like transcription factor 1.
   
  
 0.502
FOXB2
Forkhead box B2.
      
 0.481
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.