STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBP1Upstream binding protein 1. (570 aa)    
Predicted Functional Partners:
BZW1
Basic leucine zipper and W2 domains 1.
      
 0.857
CLASP2
Cytoplasmic linker associated protein 2.
   
  
 0.814
FBXL2
F-box and leucine rich repeat protein 2.
      
 0.786
RPL21
Uncharacterized protein.
      
 0.707
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
   
  
 0.652
LMNB2
Lamin B2; Belongs to the intermediate filament family.
   
  
 0.563
SSU72
Uncharacterized protein.
      
 0.561
TRIP12
Thyroid hormone receptor interactor 12.
   
  
 0.558
POFUT1
Protein O-fucosyltransferase 1.
   
  
 0.536
NSD1
Nuclear receptor binding SET domain protein 1.
   
 
 0.530
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.