STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGCESarcoglycan epsilon. (496 aa)    
Predicted Functional Partners:
PEG10
CCHC-type domain-containing protein.
   
  
 0.882
SGCZ
Sarcoglycan zeta.
   
 
 0.812
NNAT
Neuronatin.
   
  
 0.795
PLAGL1
PLAG1 like zinc finger 1.
      
 0.794
NMB
Neuromedin B.
   
 
 0.725
KTI12
KTI12 chromatin associated homolog.
     
 0.723
SGCD
Sarcoglycan delta.
   
 
 0.717
MEST
Mesoderm specific transcript.
   
  
 0.704
SNRPN
Small nuclear ribonucleoprotein-associated protein.
      
 0.686
PPP1R9A
Protein phosphatase 1 regulatory subunit 9A.
   
  
 0.680
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.