ENSCAFP00000050100 protein (Canis lupus familiaris)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAFP00000050100

Uncharacterized protein. (135 aa)

Predicted Functional Partners:

PDCD6IP

0.749

SEC31B

0.566

SEC31A

0.566

HEBP2

0.560

MARCHF8

0.515

CAST

0.493

DDAH1

0.485

FBXL12

0.481

USO1

0.481

OLFM2

0.454

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAST	ENSCAFP00000050100	ENSCAFP00000011637	ENSCAFP00000050100	Calpastatin.	Uncharacterized protein.	0.493
DDAH1	ENSCAFP00000050100	ENSCAFP00000040838	ENSCAFP00000050100	Dimethylarginine dimethylaminohydrolase 1.	Uncharacterized protein.	0.485
DDAH1	MARCHF8	ENSCAFP00000040838	ENSCAFP00000034803	Dimethylarginine dimethylaminohydrolase 1.	Membrane associated ring-CH-type finger 8.	0.650
ENSCAFP00000050100	CAST	ENSCAFP00000050100	ENSCAFP00000011637	Uncharacterized protein.	Calpastatin.	0.493
ENSCAFP00000050100	DDAH1	ENSCAFP00000050100	ENSCAFP00000040838	Uncharacterized protein.	Dimethylarginine dimethylaminohydrolase 1.	0.485
ENSCAFP00000050100	FBXL12	ENSCAFP00000050100	ENSCAFP00000030345	Uncharacterized protein.	F-box and leucine rich repeat protein 12.	0.481
ENSCAFP00000050100	HEBP2	ENSCAFP00000050100	ENSCAFP00000000386	Uncharacterized protein.	Heme binding protein 2.	0.560
ENSCAFP00000050100	MARCHF8	ENSCAFP00000050100	ENSCAFP00000034803	Uncharacterized protein.	Membrane associated ring-CH-type finger 8.	0.515
ENSCAFP00000050100	OLFM2	ENSCAFP00000050100	ENSCAFP00000026532	Uncharacterized protein.	Olfactomedin 2.	0.454
ENSCAFP00000050100	PDCD6IP	ENSCAFP00000050100	ENSCAFP00000007042	Uncharacterized protein.	Programmed cell death 6 interacting protein.	0.749
ENSCAFP00000050100	SEC31A	ENSCAFP00000050100	ENSCAFP00000053640	Uncharacterized protein.	SEC31 homolog A, COPII coat complex component.	0.566
ENSCAFP00000050100	SEC31B	ENSCAFP00000050100	ENSCAFP00000014239	Uncharacterized protein.	SEC31 homolog B, COPII coat complex component.	0.566
ENSCAFP00000050100	USO1	ENSCAFP00000050100	ENSCAFP00000062029	Uncharacterized protein.	USO1 vesicle transport factor.	0.481
FBXL12	ENSCAFP00000050100	ENSCAFP00000030345	ENSCAFP00000050100	F-box and leucine rich repeat protein 12.	Uncharacterized protein.	0.481
FBXL12	OLFM2	ENSCAFP00000030345	ENSCAFP00000026532	F-box and leucine rich repeat protein 12.	Olfactomedin 2.	0.646
HEBP2	ENSCAFP00000050100	ENSCAFP00000000386	ENSCAFP00000050100	Heme binding protein 2.	Uncharacterized protein.	0.560
HEBP2	SEC31A	ENSCAFP00000000386	ENSCAFP00000053640	Heme binding protein 2.	SEC31 homolog A, COPII coat complex component.	0.515
MARCHF8	DDAH1	ENSCAFP00000034803	ENSCAFP00000040838	Membrane associated ring-CH-type finger 8.	Dimethylarginine dimethylaminohydrolase 1.	0.650
MARCHF8	ENSCAFP00000050100	ENSCAFP00000034803	ENSCAFP00000050100	Membrane associated ring-CH-type finger 8.	Uncharacterized protein.	0.515
OLFM2	ENSCAFP00000050100	ENSCAFP00000026532	ENSCAFP00000050100	Olfactomedin 2.	Uncharacterized protein.	0.454