STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EBF2EBF transcription factor 2. (648 aa)    
Predicted Functional Partners:
SIX1
SIX homeobox 1.
   
  
 0.716
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.566
LRRC17
Leucine rich repeat containing 17.
      
 0.563
LHX9
LIM homeobox 9.
   
  
 0.559
YOD1
YOD1 deubiquitinase.
    
   0.534
PLAA
Phospholipase A2 activating protein.
    
   0.534
PRDM16
PR/SET domain 16.
    
 
 0.509
ZFP36L1
ZFP36 ring finger protein like 1.
   
  
 0.496
BARHL2
BarH like homeobox 2.
   
  
 0.486
NKX6-2
NK6 homeobox 2.
      
 0.485
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.