STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUSL1Pseudouridine synthase like 1. (564 aa)    
Predicted Functional Partners:
MRPL17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
  
 0.766
TRUB2
TruB pseudouridine synthase family member 2.
   
 0.739
POLR1C
RNA polymerase I and III subunit C.
  
  
 0.701
POLR2C
RNA polymerase II subunit C.
  
  
 0.699
METTL15
Methyltransferase like 15.
  
 
 0.674
MRRF
Mitochondrial ribosome recycling factor.
  
  
 0.658
RBFA
Uncharacterized protein.
   
  
 0.653
GATD3A
Uncharacterized protein.
      
 0.653
TWNK
Twinkle mtDNA helicase.
   
  
 0.644
GTPBP10
GTP binding protein 10.
   
 
 0.632
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.