STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAT3FAT atypical cadherin 3. (4612 aa)    
Predicted Functional Partners:
COL28A1
Collagen type XXVIII alpha 1 chain.
    
 
 0.566
CACNG3
Calcium voltage-gated channel auxiliary subunit gamma 3.
   
  
 0.524
SUPT4H1
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
   
  
 0.521
TECTB
Tectorin beta.
   
  
 0.515
SMPX
Small muscle protein X-linked.
      
 0.515
SEMA5B
Semaphorin 5B.
    
 
 0.507
ITGAV
Integrin subunit alpha V; Belongs to the integrin alpha chain family.
   
 
 0.506
UAP1
UDP-N-acetylglucosamine pyrophosphorylase 1.
      
 0.504
CSMD3
CUB and Sushi multiple domains 3.
   
 
 0.499
SIGLECL1-2
SIGLEC family like 1.
    
 
 0.491
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.