STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CICCapicua transcriptional repressor. (2502 aa)    
Predicted Functional Partners:
ATXN1
Ataxin 1.
    
 
 0.976
PAFAH1B2
Platelet activating factor acetylhydrolase 1b catalytic subunit 2.
   
  
 0.819
PAFAH1B3
Platelet activating factor acetylhydrolase 1b catalytic subunit 3.
   
  
 0.750
ATXN1L
Ataxin 1 like.
    
 
 0.722
PRRC2A
Proline rich coiled-coil 2A.
   
    0.665
VAV3
Vav guanine nucleotide exchange factor 3.
      
 0.612
RORA
RAR related orphan receptor A.
      
 0.594
LIPE
Lipase E, hormone sensitive type.
      
 0.561
HIKESHI
Heat shock protein nuclear import factor hikeshi.
      
 0.515
HIPK1
Homeodomain interacting protein kinase 1.
   
  
 0.508
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.