STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMDN3Regulator of microtubule dynamics 3. (508 aa)    
Predicted Functional Partners:
VAPB
VAMP associated protein B and C.
   
 
 0.699
RMDN2
Regulator of microtubule dynamics 2.
  
 
 
0.623
MBLAC2
Metallo-beta-lactamase domain containing 2.
     
 0.564
PTPN1
Tyrosine-protein phosphatase non-receptor type.
   
 
 0.533
ATP13A1
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
   
  
 0.515
SLC30A4
Solute carrier family 30 member 4.
      
 0.497
OSBPL5
Oxysterol-binding protein; Belongs to the OSBP family.
   
 
 0.483
OSBPL8
Oxysterol-binding protein; Belongs to the OSBP family.
   
 
 0.483
LYRM9
Uncharacterized protein; Belongs to the complex I LYR family.
      
 0.450
SYNJ2BP
PDZ domain-containing protein.
   
  
 0.448
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.