STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAFP00000051152Vac14_Fab1_bd domain-containing protein. (475 aa)    
Predicted Functional Partners:
INTS9
Integrator complex subunit 9.
   
 
 0.794
INTS3
Integrator complex subunit 3.
   
 
 0.756
INTS11
Integrator complex subunit 11.
   
 
 0.727
INTS6
Integrator complex subunit 6.
    
 
 0.714
INTS5
Integrator complex subunit 5.
    
 
 0.698
INTS2
Integrator complex subunit 2.
   
 
 0.698
INTS7
Integrator complex subunit 7.
   
 
 0.675
INTS1
Integrator complex subunit 1.
    
 
 0.633
INTS8
Integrator complex subunit 8.
   
 
 0.544
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 
 0.449
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.