STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAFP00000051625RRM domain-containing protein. (188 aa)    
Predicted Functional Partners:
SRSF3
Serine and arginine rich splicing factor 3.
   
 
 0.859
SRSF1
Serine and arginine rich splicing factor 1.
   
 
 0.820
SRSF9
Serine and arginine rich splicing factor 9.
   
 
 0.760
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
  
 
 0.753
SRSF2
Serine and arginine rich splicing factor 2.
  
 
0.749
SRSF7
Serine and arginine rich splicing factor 7.
   
 
 0.730
ENSCAFP00000050189
RRM domain-containing protein.
   
 
 0.730
ENSCAFP00000051708
Uncharacterized protein.
  
 
 0.676
ELAVL1
ELAV-like protein; Belongs to the RRM elav family.
  
 
 0.669
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.662
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.