STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAFP00000053050Uncharacterized protein. (93 aa)    
Predicted Functional Partners:
VTA1
Vesicle trafficking 1.
   
 
 0.916
CHMP1A
Charged multivesicular body protein 1A.
  
 
 0.864
IST1
IST1 factor associated with ESCRT-III.
    
 
 0.860
CHMP2A
Charged multivesicular body protein 2A.
   
 
 0.842
BROX
BRO1 domain and CAAX motif containing.
    
 
 0.815
CHMP4C
Charged multivesicular body protein 4C.
   
 
 0.810
CHMP3
Uncharacterized protein.
   
 
 0.726
CHMP4B
Charged multivesicular body protein 4B.
   
 
 0.714
TM9SF1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 
 0.668
VPS4A
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 
 0.636
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.