STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHORDC1Cysteine and histidine rich domain containing 1. (510 aa)    
Predicted Functional Partners:
SHC4
SHC adaptor protein 4.
      
 0.822
KLHL17
Kelch like family member 17.
   
  
 0.806
POLR3C
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  
 0.803
NUDT17
Nudix hydrolase 17.
      
 0.781
MGAT4C
MGAT4 family member C.
      
 0.780
SRM
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
    
 
 0.713
SUGT1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
   
 
 0.679
AHSA1
Activator of HSP90 ATPase activity 1.
   
 
 0.651
CIRBP
Cold inducible RNA binding protein.
   
  
 0.642
PPP5C
Serine/threonine-protein phosphatase.
   
 
 0.625
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.