STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOCKClock circadian regulator. (854 aa)    
Predicted Functional Partners:
CRY1
Cryptochrome circadian regulator 1.
   
 0.994
CRY2
Cryptochrome circadian regulator 2.
   
 0.992
PER2
Period circadian regulator 2.
    
 0.989
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
   
0.962
CSNK1D
Casein kinase 1 delta.
    
 0.949
CSNK1E
Casein kinase 1 epsilon; Belongs to the protein kinase superfamily.
   
 0.935
NPAS2
Neuronal PAS domain protein 2.
     
0.905
TIMELESS
Timeless circadian regulator.
   
 
 0.727
CREBBP
CREB binding protein.
   
 
 0.664
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
   
 
0.660
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.