STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDC4Enhancer of mRNA decapping 4. (1437 aa)    
Predicted Functional Partners:
EDC3
Enhancer of mRNA decapping 3.
   
 0.994
DCP1A
Decapping mRNA 1A.
   
 0.992
DCP2
Decapping mRNA 2.
    
 0.988
DDX6
DEAD-box helicase 6; Belongs to the DEAD box helicase family.
   
 0.948
PATL1
PAT1 homolog 1, processing body mRNA decay factor.
    
 0.884
XRN1
5'-3' exoribonuclease 1.
   
 
 0.841
PATL2
PAT1 homolog 2.
    
 
 0.814
SMG5
SMG5 nonsense mediated mRNA decay factor.
   
  
 0.731
NUFIP2
Nuclear FMR1 interacting protein 2.
   
  
 0.690
LSM7
Sm domain-containing protein.
   
 
 0.685
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.