STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC3H8Zinc finger CCCH-type containing 8. (393 aa)    
Predicted Functional Partners:
ICE2
Interactor of little elongation complex ELL subunit 2.
     
 0.898
ICE1
Interactor of little elongation complex ELL subunit 1.
   
 
 0.876
NABP2
Nucleic acid binding protein 2.
     
 0.810
ZC3H12B
Zinc finger CCCH-type containing 12B.
   
  
 0.794
SARNP
SAP domain containing ribonucleoprotein.
      
 0.789
LARP4B
La ribonucleoprotein domain family member 4B.
      
 0.783
PCF11
PCF11 cleavage and polyadenylation factor subunit.
   
 0.736
THOC3
THO complex 3.
   
  
 0.735
INTS10
Integrator complex subunit 10.
     
 0.728
INTS11
Integrator complex subunit 11.
    
 0.726
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.