STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC88ACoiled-coil domain containing 88A. (1903 aa)    
Predicted Functional Partners:
GLG1
Golgi glycoprotein 1.
   
    0.806
CCDC88C-2
Uncharacterized protein.
 
      0.785
PRR15
Proline rich 15.
      
 0.616
GNAI2
Guanine nucleotide-binding protein G(i) subunit alpha-2; Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. The G(i) proteins are involved in hormonal regulation of adenylate cyclase: they inhibit the cyclase in response to beta- adrenergic stimuli. May play a role in cell division (By similarity).
   
 
 0.610
RALGPS2
Ral GEF with PH domain and SH3 binding motif 2.
   
  
 0.582
SCAF11
SR-related CTD associated factor 11.
   
  
 0.577
ABRACL
ABRA C-terminal like.
      
 0.569
PNISR
PNN interacting serine and arginine rich protein.
   
  
 0.561
AGFG1
ArfGAP with FG repeats 1.
   
  
 0.561
AIMP1
Aminoacyl tRNA synthetase complex interacting multifunctional protein 1.
      
 0.561
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.