STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAFP00000055086Uncharacterized protein. (170 aa)    
Predicted Functional Partners:
TMEM214
Transmembrane protein 214.
      
 0.675
TMEM68
Transmembrane protein 68.
      
 0.668
AMZ2
Archaelysin family metallopeptidase 2.
      
 0.566
PHACTR3
Phosphatase and actin regulator.
      
 0.564
GTF2F2
General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.
      
 0.560
CGNL1
Cingulin like 1.
      
 0.515
SH2B2
SH2B adaptor protein 2.
      
 0.515
OPALIN
Oligodendrocytic myelin paranodal and inner loop protein.
      
 0.510
ATP6V1H
ATPase H+ transporting V1 subunit H.
      
 0.480
NDUFA9
NADH:ubiquinone oxidoreductase subunit A9.
      
 0.480
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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