STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHISA4Uncharacterized protein. (161 aa)    
Predicted Functional Partners:
SH3D21
SH3 domain containing 21.
      
 0.678
LRRC40
Leucine rich repeat containing 40.
      
 0.677
BEND7
BEN domain containing 7.
      
 0.677
NABP2
Nucleic acid binding protein 2.
      
 0.673
MOCS1
Molybdenum cofactor synthesis 1.
      
 0.672
NAIF1
Nuclear apoptosis inducing factor 1.
      
 0.666
EDC4
Enhancer of mRNA decapping 4.
   
  
 0.661
LCTL
Lactase like; Belongs to the glycosyl hydrolase 1 family.
   
  
 0.659
SNAPC3
Small nuclear RNA activating complex polypeptide 3.
      
 0.644
PPP1R27
Protein phosphatase 1 regulatory subunit 27.
    
 
 0.643
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.