STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH15Protocadherin related 15. (1847 aa)    
Predicted Functional Partners:
CDH23
Cadherin related 23.
   
 
0.997
MYO7A
Myosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 
 0.956
LHFPL5
LHFPL tetraspan subfamily member 5.
   
 
 0.934
USH1C
USH1 protein network component harmonin.
   
 
 0.921
CDHR2
Cadherin related family member 2.
   
 
0.883
USH1G
USH1 protein network component sans.
   
 
 0.882
USH2A
Usherin.
   
  
 0.877
CLRN1
Clarin 1.
      
 0.824
CIB2
Calcium and integrin binding family member 2.
      
 0.818
STRC
Stereocilin.
    
 
 0.802
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.