STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCHCR1Coiled-coil alpha-helical rod protein 1. (947 aa)    
Predicted Functional Partners:
VARS1
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.803
TCF19
Transcription factor 19.
   
  
 0.758
METTL6
SH3 domain binding protein 5.
   
  
 0.716
KANSL2
KAT8 regulatory NSL complex subunit 2.
      
 0.710
CDSN
Corneodesmosin.
      
 0.702
DMBX1
Diencephalon/mesencephalon homeobox 1.
   
 
 0.689
SRM
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
   
  
 0.689
KRT34
IF rod domain-containing protein; Belongs to the intermediate filament family.
    
 
 0.685
LUC7L
LUC7 like.
   
  
 0.675
PGAP3
Post-GPI attachment to proteins factor 3; Involved in the lipid remodeling steps of GPI-anchor maturation; Belongs to the PGAP3 family.
      
 0.672
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.