STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUM2Pumilio RNA binding family member 2. (1053 aa)    
Predicted Functional Partners:
NANOS1
Nanos-type domain-containing protein; Belongs to the nanos family.
   
 
 0.871
NANOS3
Nanos C2HC-type zinc finger 3; Belongs to the nanos family.
   
 
 0.743
CNOT1
CCR4-NOT transcription complex subunit 1.
   
 
 0.722
KHSRP
KH-type splicing regulatory protein.
   
 
 0.695
TRA2A
Transformer 2 alpha homolog.
   
 
 0.691
COX17
Cytochrome c oxidase copper chaperone; Copper metallochaperone essential for the assembly of the mitochondrial respiratory chain complex IV (CIV), also known as cytochrome c oxidase. Binds two copper ions and delivers them to the metallochaperone SCO1 which transports the copper ions to the Cu(A) site on the cytochrome c oxidase subunit II (MT-CO2/COX2).
    
 
 0.690
NIPBL
Nipped-B protein.
   
    0.681
C6H16orf54
Chromosome 6 C16orf54 homolog.
      
 0.678
STAG2
Stromal antigen 2.
   
    0.671
SCAF11
SR-related CTD associated factor 11.
   
    0.670
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.