TIMM9 protein (Canis lupus familiaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TIMM9

Translocase of inner mitochondrial membrane 9. (89 aa)

Predicted Functional Partners:

TIMM10

0.989

TIMM10B

0.938

TIMM22

0.903

LOC486776

0.663

TIMM29

0.636

TIMM17A

0.635

AGK

0.625

TIMM8B

0.613

CHCHD4

0.608

CCDC58

0.606

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGK	TIMM10	ENSCAFP00000005803	ENSCAFP00000011595	Acylglycerol kinase.	Translocase of inner mitochondrial membrane 10.	0.821
AGK	TIMM10B	ENSCAFP00000005803	ENSCAFP00000040602	Acylglycerol kinase.	Translocase of inner mitochondrial membrane 10B.	0.889
AGK	TIMM22	ENSCAFP00000005803	ENSCAFP00000036351	Acylglycerol kinase.	Translocase of inner mitochondrial membrane 22.	0.810
AGK	TIMM29	ENSCAFP00000005803	ENSCAFP00000025968	Acylglycerol kinase.	Translocase of inner mitochondrial membrane 29.	0.926
AGK	TIMM9	ENSCAFP00000005803	ENSCAFP00000057257	Acylglycerol kinase.	Translocase of inner mitochondrial membrane 9.	0.625
CCDC58	TIMM8B	ENSCAFP00000041282	ENSCAFP00000040514	Coiled-coil domain containing 58.	Translocase of inner mitochondrial membrane 8 homolog B; Belongs to the small Tim family.	0.579
CCDC58	TIMM9	ENSCAFP00000041282	ENSCAFP00000057257	Coiled-coil domain containing 58.	Translocase of inner mitochondrial membrane 9.	0.606
CHCHD4	TIMM10	ENSCAFP00000006615	ENSCAFP00000011595	Coiled-coil-helix-coiled-coil-helix domain containing 4.	Translocase of inner mitochondrial membrane 10.	0.827
CHCHD4	TIMM10B	ENSCAFP00000006615	ENSCAFP00000040602	Coiled-coil-helix-coiled-coil-helix domain containing 4.	Translocase of inner mitochondrial membrane 10B.	0.683
CHCHD4	TIMM17A	ENSCAFP00000006615	ENSCAFP00000015634	Coiled-coil-helix-coiled-coil-helix domain containing 4.	Mitochondrial import inner membrane translocase subunit TIM17; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.528
CHCHD4	TIMM22	ENSCAFP00000006615	ENSCAFP00000036351	Coiled-coil-helix-coiled-coil-helix domain containing 4.	Translocase of inner mitochondrial membrane 22.	0.532
CHCHD4	TIMM8B	ENSCAFP00000006615	ENSCAFP00000040514	Coiled-coil-helix-coiled-coil-helix domain containing 4.	Translocase of inner mitochondrial membrane 8 homolog B; Belongs to the small Tim family.	0.491
CHCHD4	TIMM9	ENSCAFP00000006615	ENSCAFP00000057257	Coiled-coil-helix-coiled-coil-helix domain containing 4.	Translocase of inner mitochondrial membrane 9.	0.608
LOC486776	TIMM10	ENSCAFP00000036799	ENSCAFP00000011595	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Translocase of inner mitochondrial membrane 10.	0.723
LOC486776	TIMM10B	ENSCAFP00000036799	ENSCAFP00000040602	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Translocase of inner mitochondrial membrane 10B.	0.693
LOC486776	TIMM17A	ENSCAFP00000036799	ENSCAFP00000015634	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Mitochondrial import inner membrane translocase subunit TIM17; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.917
LOC486776	TIMM22	ENSCAFP00000036799	ENSCAFP00000036351	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Translocase of inner mitochondrial membrane 22.	0.802
LOC486776	TIMM29	ENSCAFP00000036799	ENSCAFP00000025968	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Translocase of inner mitochondrial membrane 29.	0.478
LOC486776	TIMM8B	ENSCAFP00000036799	ENSCAFP00000040514	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Translocase of inner mitochondrial membrane 8 homolog B; Belongs to the small Tim family.	0.439
LOC486776	TIMM9	ENSCAFP00000036799	ENSCAFP00000057257	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Translocase of inner mitochondrial membrane 9.	0.663