STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (163 aa)    
Predicted Functional Partners:
NOP56
NOP56 ribonucleoprotein.
   
 0.997
NOP58
NOP58 ribonucleoprotein.
   
 0.995
UTP15
UTP15 small subunit processome component.
   
 0.990
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 0.985
FBL
Fibrillarin.
   
 0.978
PRPF31
Nop domain-containing protein.
   
 0.975
UTP18
UTP18 small subunit processome component.
   
 0.965
UTP4
UTP4 small subunit processome component.
   
 0.960
RRP7
Ribosomal RNA processing 7 homolog.
   
 0.953
HEATR1
HEAT repeat containing 1.
   
 0.951
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.