STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLSTN3Calsyntenin 3. (990 aa)    
Predicted Functional Partners:
SH3BP5L
SH3 binding domain protein 5 like.
      
 0.846
ERP27
Endoplasmic reticulum protein 27.
      
 0.807
LRRTM1
Leucine rich repeat transmembrane neuronal 1.
   
  
 0.783
PEX5
Peroxisomal biogenesis factor 5.
 
 
  
 0.741
MANSC1
MANSC domain containing 1.
   
 
 0.735
TELO2
Telomere maintenance 2.
   
  
 0.698
SNCAIP
Synuclein alpha interacting protein.
      
 0.678
CDH18
Cadherin 18; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.660
IGSF21
Immunoglobin superfamily member 21.
   
 
 0.639
USP5
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
   
  
 0.596
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.