STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTPBP6GTP binding protein 6 (putative). (718 aa)    
Predicted Functional Partners:
MRPL32
Mitochondrial ribosomal protein L32.
    
 
 0.952
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.940
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.935
MRPL21
Mitochondrial ribosomal protein L21.
  
   0.931
MRPL17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
    
   0.929
DHRSX
Dehydrogenase/reductase X-linked.
   
  
 0.879
CRLF2
Cytokine receptor like factor 2.
   
  
 0.859
MRPL20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
    
   0.809
ENSCAFP00000051396
Uncharacterized protein.
    
   0.809
MRPL9
RIBOSOMAL_L9 domain-containing protein.
   
 
 0.794
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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