STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKFN1Ankyrin repeat and fibronectin type III domain containing 1. (1175 aa)    
Predicted Functional Partners:
CEP72
Centrosomal protein 72.
   
    0.805
TTLL9
Tubulin tyrosine ligase like 9.
   
  
 0.805
C17H2orf81
Uncharacterized protein.
   
    0.805
SMG8
SMG8 nonsense mediated mRNA decay factor.
   
  
 0.803
AATF
Apoptosis antagonizing transcription factor.
      
 0.802
MRM1
Mitochondrial rRNA methyltransferase 1.
   
  
 0.790
PCTP
Phosphatidylcholine transfer protein.
      
 0.640
DHRS11
Dehydrogenase/reductase 11; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.591
RNF43
Ring finger protein 43.
   
  
 0.580
PDE7B
Phosphodiesterase.
      
 0.566
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.