STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HPCAL4Hippocalcin like 4. (257 aa)    
Predicted Functional Partners:
TAGLN3
Transgelin; Belongs to the calponin family.
   
 
 0.699
LSAMP
Limbic system associated membrane protein.
   
  
 0.691
MAPT
Microtubule-associated protein.
   
 
 0.585
ACSBG1
Acyl-CoA synthetase bubblegum family member 1.
   
 
 0.572
PI4KB
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
    
 
 0.563
VWC2
Von Willebrand factor C domain containing 2.
   
  
 0.521
ARHGAP36
Rho GTPase activating protein 36.
    
 
 0.521
UTS2B
Urotensin 2B.
      
 0.512
ITIH5
Inter-alpha-trypsin inhibitor heavy chain 5.
    
 
 0.505
PPARGC1A
PPARG coactivator 1 alpha.
   
  
 0.491
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.